Insertion junction: CLIP2.022070_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022070
Chromosome:chromosome 3
Location:3373974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166400 (1 of 2) IPR002591//IPR017849//IPR017850 - Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase // Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACCTGGTGGATCTCCAACAACCCCAACGGCAACTTTGCCAAGCTCGC
Internal bar code:AGGGTACCTTTGTAAGGAGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:74.0741
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACTACTCACGATTCGGG
Suggested primer 2:AGGCCACACACTTCACCAAA