Insertion junction: CLIP2.022070_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022070
Chromosome:chromosome 3
Location:3373976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166400 (1 of 2) IPR002591//IPR017849//IPR017850 - Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase // Alkaline phosphatase-like, alpha/beta/alpha // Alkaline-phosphatase-like, core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGTTGTGCATACCATCAATGCTGTTGGGGTACGGGTAGGGAGGGAGG
Internal bar code:ATAGATAAGAAATAGATCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3149
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCACACACTTCACCAAA
Suggested primer 2:CGGACTACTCACGATTCGGG