Insertion junction: CLIP2.022075_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022075
Chromosome:chromosome 3
Location:6717427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195950 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCACTTCGATGGCCGCGCGTTGCGCATCGAAAGTGCCAACGGGGTCA
Internal bar code:TTAGTGCTGCTCTTCTGTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3603
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCAAATGATAGGGCGCT
Suggested primer 2:GCTATCATAAGTGCCCGCCT