Insertion junction: CLIP2.022078_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022078
Chromosome:chromosome 1
Location:5700902
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040801 (1 of 3) PTHR18937//PTHR18937:SF254 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGAGCCTGAGGAGCCCAGGCTATGCGCCGGGTACCGGCGGTGGCCAG
Internal bar code:GTTATATAGTAGGATATGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2520
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCATTCCGCAACACA
Suggested primer 2:TCCAGTCGGGTATCGGAACT