Insertion junction: CLIP2.022111_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022111
Chromosome:chromosome 2
Location:100896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g073826 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGCCGCCACCCAGCCACCCATCCATCGCCCAGCCAGCCGCCCGCCCA
Internal bar code:ACATTGCCAGGACGGTCACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:4463
LEAP-Seq percent confirming:55.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGTACGTGGACGAGTT
Suggested primer 2:GGCCGCTTCTTGTAAGGAGT