Insertion junction: CLIP2.022133_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022133
Chromosome:chromosome 6
Location:1198682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258363 (1 of 1) IPR000048//IPR001611//IPR003591 - IQ motif, EF-hand binding site // Leucine-rich repeat // Leucine-rich repeat, typical subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGTAGTCGCCGGCGCCGCTGGTACGGCGTCGGTTGTCGTACGACGGC
Internal bar code:GCGCGGAACTTCCCCTAATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2177
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCCATGATGCAACAACA
Suggested primer 2:ACACTCAACCAAGAGCTCCG