Insertion junction: CLIP2.022135_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022135
Chromosome:chromosome 17
Location:1346913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705806 Chlamydomonas-specific family W protein; (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCAATGCACCGCATGCAGCAGCCCCCGGCACACCTGCTGCTGCTCGC
Internal bar code:TTGCGGATGGGATCAAAAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:6142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTACTGCGGCTTTGTTGTGC
Suggested primer 2:GGCAATCCAGTTGGGGTGTA