Insertion junction: CLIP2.022150_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022150
Chromosome:chromosome 3
Location:1790252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153950 TRP12 Transient receptor potential ion channel protein; (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGCTGGACCTGGCGTGTGAGACGAAGGACGTGGATTTCGTTTCCACC
Internal bar code:GTATCAGCTAAACTAACTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1195
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AACAAGCACAGCACAGCATG
Suggested primer 2:CTCGACACATGCAGTCAGGT