Insertion junction: CLIP2.022159_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022159
Chromosome:chromosome 13
Location:1124272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569400 TAUD1 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAATGCGAGTGAAGGGCACCACGCTACCTTGCCTGTTGGGTGGCCGAA
Internal bar code:GAATACACTGCACCCTTTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1309
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTTTAGCGTTCGCGAAG
Suggested primer 2:CCCAGGTCCTTGATGTGTCC