Insertion junction: CLIP2.022159_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022159
Chromosome:chromosome 13
Location:1124279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g569400 TAUD1 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTGAGGGCTCCGACGCCTGGGTTGCGGCCGACTTCCCGAGCCTTGAGA
Internal bar code:GAATACACTGCACCCTTTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1334
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGGTCCTTGATGTGTCC
Suggested primer 2:GCTCTTTAGCGTTCGCGAAG