Insertion junction: CLIP2.022161_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022161
Chromosome:chromosome 12
Location:8817997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546800 PHC53 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGGCCCAAAAGACCCGCACGGCACACACGTGCTGCCCGCGCACCTGCG
Internal bar code:TGTAATTCATATGAGTTAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2350
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAAGGGGTAGTGGGAGTA
Suggested primer 2:TACTTGGCCAACGTCTCCAC