Insertion junction: CLIP2.022172_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022172
Chromosome:chromosome 9
Location:5262023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407120 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGCTTCTCCTCATGCTACTACTGCTGCTACCGGTGATGGGGACGCTG
Internal bar code:AGAGTAGATACACATGATAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:433
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTGGGTTATGGTTGGG
Suggested primer 2:CGTCATCGTCAGCTGCTACA