Insertion junction: CLIP2.022182_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022182
Chromosome:chromosome 15
Location:636938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636896 (1 of 1) PTHR11082//PTHR11082:SF29 - TRNA-DIHYDROURIDINE SYNTHASE // TRNA-DIHYDROURIDINE SYNTHASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAAGATCGGCCGTCGCGTCTGCCGTAGCTTGTTGCGCTTTGCGCGCAT
Internal bar code:GTTACGGCGTAGAACTCGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1443
LEAP-Seq percent confirming:4.65116
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCTAGAGACCCGGGAT
Suggested primer 2:GGTTGGAACAGGCTTGCAAG