Insertion junction: CLIP2.022184_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022184
Chromosome:chromosome 9
Location:1976805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397000 (1 of 28) PTHR31600//PTHR31600:SF2 - FAMILY NOT NAMED // TINY MACROCYSTS PROTEIN B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAATGGGAGGCATACCGTATCTATCTGCGCTGCGCATAGGGGAGCAA
Internal bar code:AAGGGGAGCGACACCCAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3582
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCGGCATTCTTGTTGGAT
Suggested primer 2:ACATCCTCCTCCGTACAGCT