Insertion junction: CLIP2.022195_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022195
Chromosome:chromosome 2
Location:5388513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113652 (1 of 2) PTHR24320:SF1 - 3-KETODIHYDROSPHINGOSINE REDUCTASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGCCGCCACCAGTGTGTATGCGGCCACAGCTCCGGAGCTGGAGCCG
Internal bar code:CACGGTTTAATCCATTGTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4582
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTAACAGCACCAAGTCT
Suggested primer 2:GACCTCACATTCAGCCCACA