Insertion junction: CLIP2.022196_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022196
Chromosome:chromosome 16
Location:2075433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657300 CPI1 Cyclopropyl isomerase-like protein; (1 of 1) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGACGCTGAGCTCATCCGTTGACGCGGCGTGGCGGGGTTCGCCATAC
Internal bar code:AATTCTTGACTTTCATAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4751
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:AATCGTGTCGTCCTGGCTTT
Suggested primer 2:CAAGAGTCCGTGCAAGAGGT