Insertion junction: CLIP2.022196_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022196
Chromosome:chromosome 16
Location:2075436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657300 CPI1 Cyclopropyl isomerase-like protein; (1 of 1) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACATGCATGCAACCTGCTTGCAGCCCCCACGGCGCACCTTGCACCG
Internal bar code:AATTCTTGACTTTCATAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2355
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGTCCGTGCAAGAGGT
Suggested primer 2:AATCGTGTCGTCCTGGCTTT