Insertion junction: CLIP2.022198_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022198
Chromosome:chromosome 12
Location:1127128
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g491000 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGCGGCAGTGGCAGCAACAACAACAGCAGCTGCAGCAGGAGCAGGG
Internal bar code:CAACTTACAGCTCCAATGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1253
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCCGTCCGTATCCGAC
Suggested primer 2:AGCCCTTGGAAACCTACACG