Insertion junction: CLIP2.022213_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022213
Chromosome:chromosome 6
Location:4717512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279183 GEX150 (1 of 1) PF09808 - Small nuclear RNA activating complex (SNAPc), subunit SNAP43 (SNAPc_SNAP43) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTTGCGCAATCCCGTGTCACTGCACAGGGTGGAGCTGCAATCCGCGG
Internal bar code:CTGGTCACGGATTCGTCGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2277
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGCTAAATTCTGCCTCA
Suggested primer 2:TTCAGACCTCCTTCACACGC