Insertion junction: CLIP2.022220_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022220
Chromosome:chromosome 16
Location:5887615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679400 (1 of 1) PF16501 - S phase cyclin A-associated protein in the endoplasmic reticulum (SCAPER_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCACCAGCCTGAAGCCCAACGTGTGTGGTGCACAGCCCGGTACCCCGT
Internal bar code:ACTTAGCCGGTGAAGGTCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1890
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTACCCTTCAGCATCGTC
Suggested primer 2:GCTCACACTACCCCCTTGTC