Insertion junction: CLIP2.022222_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022222
Chromosome:chromosome 1
Location:6138071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043600 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGTAAGCGTGTGCGGCCCGCGCGCGGCCAAGCCGTAGGGTTGCGGC
Internal bar code:CCGCGAAATAATGAGGATGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1581
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTAGAGGAGGGGAGCT
Suggested primer 2:AGATGTGACGTCAGCTGCAA