Insertion junction: CLIP2.022230_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022230
Chromosome:chromosome 3
Location:5646719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186250 (1 of 1) PTHR22935//PTHR22935:SF77 - PENICILLIN-BINDING PROTEIN // BETA-LACTAMASE FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGTAGGTGCTCAGGTGGACGCCACCGCTGCTGCCATTCCCGCGGTG
Internal bar code:ACGGTAAGGCACGTTTTGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2480
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGATAGAATCGGTCGCA
Suggested primer 2:CATTACAGTGATTGCGGCGG