Insertion junction: CLIP2.022232_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022232
Chromosome:chromosome 12
Location:4056291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516450 CAG1 Gamma carbonic anhydrase 1; (1 of 1) PTHR13061//PTHR13061:SF7 - DYNACTIN SUBUNIT P25 // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTACTTCGCGTAAAGCGCAGCGATGGCGATGGTGAAGGAGATAGCAGAG
Internal bar code:AGCCAAGGGCAACTAGGCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2050
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGGGGGCTTAGCAGGTA
Suggested primer 2:ACAGCTCCGTTTGGTATGGG