Insertion junction: CLIP2.022236_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022236
Chromosome:chromosome 7
Location:1155118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321000 CYG14 (1 of 1) PF00211//PF01590 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // GAF domain (GAF); Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGAAGGCGCTCCTGCCTAGTATCGCAGTCACTGGGCGGGATCCAGCAT
Internal bar code:TCTTTTTAGAGGCGGTATTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4384
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGTCAGCCAGCCAGTCT
Suggested primer 2:AGTGGGAACAAGGGTTTGCA