Insertion junction: CLIP2.022236_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022236
Chromosome:chromosome 7
Location:1155121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321000 CYG14 (1 of 1) PF00211//PF01590 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // GAF domain (GAF); Adenylate/guanylate cyclase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCCATTGTAGCCGCTCTCCCACAGGTATGTTGGGAGCTCGCCCTTGC
Internal bar code:TCTTTTTAGAGGCGGTATTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1736
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGGAACAAGGGTTTGCA
Suggested primer 2:GAATGTCAGCCAGCCAGTCT