Insertion junction: CLIP2.022237_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022237
Chromosome:chromosome 6
Location:5451035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285900 FAP396 (1 of 2) IPR000104//IPR003590 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 396 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGCCGCCGCCACCAGCTGCTGCATCATCAGGTAGTCGGCGTCGCGGT
Internal bar code:CACCCATTGAGACGCCTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3895
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTTGTTGGAAGGGGCC
Suggested primer 2:GTTCGATGATGACAAGCCGC