Insertion junction: CLIP2.022237_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022237
Chromosome:chromosome 6
Location:5451038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285900 FAP396 (1 of 2) IPR000104//IPR003590 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 396 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGGCGGGCCAGTCGCGGCCGTCCACGGCGCCGGCGGCGGCGGGCAG
Internal bar code:CACCCATTGAGACGCCTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGATGATGACAAGCCGC
Suggested primer 2:GTTTGTTGTTGGAAGGGGCC