Insertion junction: CLIP2.022258_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022258
Chromosome:chromosome 5
Location:2833726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241250 (1 of 1) IPR000104//IPR000253//IPR001357 - Antifreeze protein, type I // Forkhead-associated (FHA) domain // BRCT domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACAGCCAGCGGTACGACACAATGGCAATGCCCCACTCCAGCGCCTTG
Internal bar code:AGTTAAGCGCGCTAGCGCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2951
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGGCTCAGGTGACACAT
Suggested primer 2:CGTACGGCTCATCCAGACTC