Insertion junction: CLIP2.022260_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022260
Chromosome:chromosome 7
Location:2313096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327950 MAW9 Membrane-associated hydroxyproline-rich glycoprotein 9 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGCCACCCAGCCCTGAGCCTCCCAGCCCTGAGCCTCCCAGCCCTAAG
Internal bar code:GTTACTTCATGCGGGGGCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAAGCATGCAACCCGTT
Suggested primer 2:CCTCACTTTCGACCCATGCT