Insertion junction: CLIP2.022265_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022265
Chromosome:chromosome 13
Location:3552585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587800 NUP188 (1 of 1) PTHR31431:SF1 - NUCLEOPORIN NUP188 HOMOLOG; Nucleoporin 188 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGTCCCAAGCCCGAACACGAGACCCAGGCAGCGCGCCATGCTCCGAA
Internal bar code:GCACGATCGAGCCAACTGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1539
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGATCCTCACAGCAGAG
Suggested primer 2:GGCACGTGTGGTAACTCTGA