Insertion junction: CLIP2.022274_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022274
Chromosome:chromosome 6
Location:8220557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306400 (1 of 1) 4.4.1.14 - 1-aminocyclopropane-1-carboxylate synthase / S-adenosyl-L-methionine methylthioadenosine-lyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAGAAATCGGTGTGGGTGTTGCAGTCGTCAGCCCAGTGATGAACTTG
Internal bar code:CGGATTTGCACTGGGAAGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2138
LEAP-Seq percent confirming:80.2083
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTTGCATGTGTTGGTGCG
Suggested primer 2:AGAGGTTTGTGGTATGGGCG