Insertion junction: CLIP2.022282_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022282
Chromosome:chromosome 6
Location:4665466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278550 (1 of 3) PTHR12385//PTHR12385:SF44 - CTL TRANSPORTER // PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCACGCTGCTGCTGCTGAGCCTGGCGGCGGCGCTGGTGCTGACGG
Internal bar code:TTCACCTGCTACATAAAATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3171
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGACAGTCAGGACACACG
Suggested primer 2:TACAGCCTGCTGATCCTCCT