Insertion junction: CLIP2.022286_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022286
Chromosome:chromosome 9
Location:5983018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412350 (1 of 1) PTHR16557:SF4 - 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATAACACCTCCTGACATCCCAACGCGAACAGGAAGGGCCGTACGACA
Internal bar code:GGGGGTAGGATGGTCATCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:470
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTGTGTGGA
Suggested primer 2:AGCAGCAGCAACAGCAATTG