Insertion junction: CLIP2.022289_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022289
Chromosome:chromosome 1
Location:2363349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013400 PIGS1 (1 of 1) K05291 - phosphatidylinositol glycan, class S (PIGS); GPI transamidase component PIG-S intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATCTCACTTGCGCAGCAACCAAGATTGTGTCCCGAATCCAGTAGGAT
Internal bar code:ATACTTGCCGAGGTCAAGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1987
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCAGCACAACGACCTCT
Suggested primer 2:ATCTCATGCGTAGACAGGCG