Insertion junction: CLIP2.022289_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022289
Chromosome:chromosome 2
Location:5079322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111300 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTACCGACCCATGGTGCCGACCCAAGAGCATGTTGGTCATGTAAAC
Internal bar code:CTGTGGCTCCAAGGAATGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4885
LEAP-Seq percent confirming:95.8763
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGGAAGAGCAGTTCCT
Suggested primer 2:TAGCGGATGATCACGACACG