Insertion junction: CLIP2.022299_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022299
Chromosome:chromosome 2
Location:928236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079200 (1 of 1) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCCGACGTGATGAAGCTAATGAACTCCGAGACGCACTCCTGGACCGT
Internal bar code:GTGCGTAGTGTGGTGGTGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4008
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACGTCTGGGTTTCAGTA
Suggested primer 2:AGACAAAGGACCTGACAGCG