Insertion junction: CLIP2.022312_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022312
Chromosome:chromosome 15
Location:5583378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre46.g760947 (1 of 7) IPR022772 - von Hippel-Lindau disease tumour suppressor, beta/alpha domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGAGGGCGGCGCGGTGAGGTAGTGTGTGTCGCGTGTGGGCATGGCCAA
Internal bar code:CGCGTGAAATTGTCGCGTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:168
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCATGTACCGCACCGTGA
Suggested primer 2:TGAGAGGAACCGCACGTAAC