Insertion junction: CLIP2.022325_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022325
Chromosome:chromosome 13
Location:4053871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590800 HTA21,HTA37 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCGGGCCTGCAATTCCCCGTCGGCCGCATTGCTCGCTACCTGAAGAA
Internal bar code:GAATTGATTAGTGATAGCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCAGGTTGGCACTACC
Suggested primer 2:TCCTTGGCAGCCTTCTTAGC