Insertion junction: CLIP2.022326_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022326
Chromosome:chromosome 8
Location:3402455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378000 (1 of 1) K18749 - protein LSM14 (LSM14, RAP55, SCD6) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGACACTTGTCGCCCTCGTCGCCCTTCACCAGAACTCACCCTTGAAGA
Internal bar code:TTGAAGCCCTTTTTAGCATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1497
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGGAAAAATGGGGGAGA
Suggested primer 2:AGTAGCAGCTTCGCCAAACT