Insertion junction: CLIP2.022336_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022336
Chromosome:chromosome 8
Location:4027682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382650 UBQ4 (1 of 2) K09313 - homeobox protein cut-like (CUTL); Bi-ubiquitin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCTGGCGGCGCTGGAGCGCGAGCGAGAGACGCTGGTGGCGAAGCTGC
Internal bar code:TCATTGGTAGTACAACAACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:722
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCCATACACACGACACAT
Suggested primer 2:TCCACACACACACACACACA