Insertion junction: CLIP2.022336_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022336
Chromosome:chromosome 8
Location:4027684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382650 UBQ4 (1 of 2) K09313 - homeobox protein cut-like (CUTL); Bi-ubiquitin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCTGCGTGTCGGGACCAGGCAACACTCATCCGCTTGAGCACCCCACC
Internal bar code:TCATTGGTAGTACAACAACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACACACACACACACACA
Suggested primer 2:ACGCCATACACACGACACAT