Insertion junction: CLIP2.022343_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022343
Chromosome:chromosome 7
Location:3288589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334450 EFH4 EF-hand domain protein; (1 of 1) IPR007044 - Cyclodeaminase/cyclohydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCCATGGCCGACCACCGACCCTTCTGTCAGACTACCGGGGCGTGCG
Internal bar code:CTTGTTTAGACTCCGGTCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3384
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAGTTCAGGGTCGGTCG
Suggested primer 2:GCGAAGAAGCGAACGGATTC