Insertion junction: CLIP2.022343_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022343
Chromosome:chromosome 7
Location:3288589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334450 EFH4 EF-hand domain protein; (1 of 1) IPR007044 - Cyclodeaminase/cyclohydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACATGTGTGGCATGGCTGCCAGTCAAGTTGTGCCTCCAGCTGAATCG
Internal bar code:CTTGTTTAGACTCCGGTCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2026
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAGAAGCGAACGGATTC
Suggested primer 2:TCAAAGTTCAGGGTCGGTCG