Insertion junction: CLIP2.022344_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022344
Chromosome:chromosome 11
Location:823348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467639 (1 of 1) PF04910 - Transcriptional repressor TCF25 (Tcf25) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACACGCACTCACCTGTCGGTCCACTGCCGCAACCACATCAGAGCCGA
Internal bar code:ACTTCGCCGTAAATGTTACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:7215
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGTGCTGTGTGTGGAT
Suggested primer 2:AGATTTAGCCCACAGCCCAC