Insertion junction: CLIP2.022346_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022346
Chromosome:chromosome 5
Location:875152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246300 (1 of 1) PTHR13554//PTHR13554:SF10 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED // 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGCGGCCGGGGGAGGTGGTGCTGGCGCTGCTGGCTCAGCCGTTTGT
Internal bar code:TAGATAAGTGGTGGCGTAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTCGCCTATTCCATCT
Suggested primer 2:AAAGCCCGGAATGGAGAGTG