Insertion junction: CLIP2.022353_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.022353
Chromosome:chromosome 7
Location:2748626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g331300 AGP3 ADP-glucose pyrophosphorylase large subunit; (1 of 1) PF00132//PF00483 - Bacterial transferase hexapeptide (six repeats) (Hexapep) // Nucleotidyl transferase (NTP_transferase) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGTAGTTTCGGTGTGTGCTTGTGGGGTTGCGGGATAGGTAGTTACAT
Internal bar code:TTATACACGCGGTCAGATACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGCGGCAATCAACACA
Suggested primer 2:CCGTGTCCGTACAGCTCTAC