Insertion junction: CLIP2.022368_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022368
Chromosome:chromosome 16
Location:1580127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653700 (1 of 1) PTHR10972//PTHR10972:SF71 - OXYSTEROL-BINDING PROTEIN-RELATED // OXYSTEROL-BINDING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTCGTCACAGGCCTGGGGCGCAAGAAGCACACCACCTTTGCGGACGA
Internal bar code:GTTCGGTCGTTTTTGTAACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2564
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAATCCGACAGAGATCG
Suggested primer 2:ACGAACTCCAAAGCCGACAT