Insertion junction: CLIP2.022375_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022375
Chromosome:chromosome 3
Location:7498189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205550 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGAGTGAGCGGGCTGGGGCGTGCCAGGCCGTGGACGGCCGACCTGCGG
Internal bar code:TCTGAAACGGCAAGGCAGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1724
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCTCTGATTGTGCCGCG
Suggested primer 2:GAAACCCTCCCTCTTCTGGC