Insertion junction: CLIP2.022379_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022379
Chromosome:chromosome 9
Location:3153841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394362 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCGGCTGCCCCCGGGGCCCCATCGCATGCCATGTGTCAGCGGCTGC
Internal bar code:CAATGTGATTTACTAGTACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5387
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGAACCTCACCTGCGCAG
Suggested primer 2:CAGAGCCCATGGACTCGAC