Insertion junction: CLIP2.022383_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022383
Chromosome:chromosome 1
Location:1329802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g006900 (1 of 6) PTHR22870//PTHR22870:SF201 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGATCCCGGCATGACTAGTTAGAAGGCGAGCTGGGGTGGGGGGGGGG
Internal bar code:TTGTGTTTTCTGTGGGCTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGCACAAACAGGTGAC
Suggested primer 2:TGCTCTTACCCACGACACAC